BSC3052

Syllabus

Instructor: Teaching assistant:
Peter Beerli
Email: beerli@fsu.edu,
Office: DSL 150-T
Phone: (850) 645 1324
Office hours: Mondays 1:30-2:30
Caroline Stahala
Email: stahala@bio.fsu.edu
Office: KIN 4079
Phone: (850) 645 8577
Office Hours: Tues 11-12

Course hours
Time: Monday and Wednesday 03:35 PM - 04:50 PM
Location: HCB 0216

Goals of this course:

Course material:  The main resources will be the following:

Office hours: are Monday 1:30 – 2:30 in my office or schedule an appointment by email to beerli@fsu.edu. My office is in the Dirac Science Library, first floor, room 150-T. The entrance to the first floor in Dirac is near the parking garage,enter the building and then turn to the left. Caroline's Office hours are on Tuesday 11-12 in KIN 4079.

Tests: There will be a mid-term and a final exam.

Homework consists of reading the appropriate chapters in the book “Principles of Conservation Biology” by Groom et al. (as preparation for class), and written assignments: 

Late policy: If assignments are late and unexcused I deduct for every day late 10% of the points. I need written excuses for failing to come to tests, and late essays. I expect that you come to class, but no excuse is needed for occasional doctor's appointments etc.

Grading: The grades are on the A-F scale. The grades will be assembled using the MID-TERM (100 points), the FINAL EXAM (100 points), the discussion assignments (4 ROP, 2 RR, each 50 points), and the essay (100 points). A total of 600 points will be distributed into the A-F grade scale. I will use the participation record during class for rounding. I will take the liberty to adjust the grade scale downward, so that fewer points are needed to get a passing grade, and (2) give plus and minus grades; in particular plus if the record shows that a grade increase is not warranted but a recognition of being in the upper range of the specific grade is just.

Grade

A

B

C

D

F

Points

 540 – 600

 480 – 539

400 – 479

 300 – 399

 0 – 300

Percent

90 – 100

80 – 89

70 – 79

60 – 69

0 – 59

 

Academic Honor Code: Students are expected to uphold the Academic Honor Code published in The Florida State University Bulletin and the Student Handbook, The first paragraph says: The Academic Honor System of Florida State University is based on the premise that each student has the responsibility to uphold the highest standards of academic integrity in the student's own work.

Students with disabilities: Students with disabilities needing academic accommodations should: (1) Register with and provide documentation to the Student Disability Resource Center [SDRC] ) in room 108 in the Student Services Building (644-9566). (2) Bring me a letter from the SDRC indicating you need academic accommodations. This should be done within the first week of classes. For more information on this see the Resource Center's web site (http://www.fsu.edu/%7Estaffair/dean/StudentDisability/index.html).

Preliminary Schedule

Week

Day

Concept

Assignments

Remarks [B = Book: Groom et al.]

1

01-07

Course introduction, student count, who am I, syllabus, expectations, homework

Characteristics of Conservation Biology

www.sc.fsu.edu/~beerli/BSC3052

B: chapter 1

2 01-12 History of conservation biology Caroline
01-14 Biodiversity I: Species, geographical distribution of species, species richness, how to measure how many species are there. Endemism. Caroline

3

01-19

Martin Luther King day -- NO CLASS

01-21

Biodiversity II: Extinction over geological time, anthropogenic extinctions, local versus global effects, extinction rate, species-area relationship

Caroline

B: chapter 3

4

01-26

Extinction

Caroline

B: chapter 3

01-28

Scientific Method, Writing Reviews, Searching papers

Assignment 1A:
Godfrey SCJ, Lawton JH, 2001. Scale and species numbers. Trends in Ecology and Evolution 16: 7 400-404.

 

5

02-02

Conservation genetics I

02-04

Conservation genetics II

Assignment 1A due today
Assignment 1B:

6

02-09

Conservation genetics III

02-11

Conservation Genetics IV

Assignment 1B due today
Assignment 2A:
Alter, S. E., Rynes, E. and Palumbi, S. R. (2007) DNA evidence for historic population size and past ecosystem impacts of gray whales. PNAS 104: 15162–15167

7

02-16

Conservation Genetics VI

02-18

Population viability analysis I

Assignment 2A due today
Assignment 2B:

8

02-23

Population viability analysis I|

Program Populus

02-25

Review weeks 1-7

Assignment 2B due today

9

03-02

MID-TERM

Mid-term

03-04

Species invasion

Assignment 3A:
Brook, B.W., J.J.O’Grady, A.P.Chapman, M.A.Burgman, H. R.Akçakaya and R. Frankham. 2000. Predictive accuracy of population viability analysis in conservation biology. Nature 404: 385–387.

For fun: FSU-website: Silent invaders

10 SPRING BREAK

11

03-16

Metapopulation, Island Biogeography

03-18

Biodiversity and Community

Assignment 3A due today

Essay title, statement, and preliminary citation list

Chap 9, especially Box 9.1, None of the case studies (although they give good examples).

B: chapter 6

12

03-23

Biodiversity and Community

03-25

Exploitation, Pollution

Essay title, due today!

Assignment 4A:
Myers, R.A., and B. Worm. 2003. Rapid worldwide depletion of predatory fish communities. Nature 423: 280-283.
(Read also the replies)

B: Chapter 7 up to 240 including box 7.1, case studies are interesting but not required.

13

03-30

Habitat fragmentation

 

04-01

Ecosystems management

Assignment 4A due today

Caroline

14

04-06

Guest lecture: Chuck Hess

Good reading:
Peterson, D. W.; Reich, P. B. 2001. Prescribed fire in oak savanna: Fire frequency effects on stand structure and dynamics. Ecological Applications 11:914-927.

04-08

Protected Areas

15

04-13

Guest lecture:

Good reading: 
Chan, K. M. A. , et al. 2006. Conservation Planning for Ecosystem Services. PLoS Biology 4: 2138-2152

04-15

Restoration of damaged ecosystems and endangered populations.

 

16

04-20

Law and Politics

Caroline

04-22

Law and Politics

Caroline

 

 

ESSAY DUE MONDAY April 27
(by email -- 11:59pm)

FINAL EXAM: Friday May 1: 3-5pm

 This syllabus, except the grading policy, can change with advance notice.

 [updated PB January, 2008]